Difference between revisions of "Lipoquality:Database"

From lipidbank_wiki
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Please click [[Lipoquality:Resource|here]] to access the lipoquality data.
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Please click [[Lipoquality:Resource|here]] to access LipoQuality data.
  
 
<h2>Dataset</h2>
 
<h2>Dataset</h2>
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; Measurement : See [http://metabolonote.kazusa.or.jp/SE110:/MS2 Metabolonote] database.
 
; Measurement : See [http://metabolonote.kazusa.or.jp/SE110:/MS2 Metabolonote] database.
  
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<h2 style="font-size:100%;text-align:left;border-bottom:3px solid #630;margin:0.2em;padding:0.2em">{{Bilingual|脂質記載法|Notation}}</h2>
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The style follows the proposal for lipidomics nomenclature
 
The style follows the proposal for lipidomics nomenclature
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Revision as of 10:25, 1 May 2019

Lipoquality

Resource


Please click here to access LipoQuality data.

Dataset

Mouse
C75BL/6J mouse fed with fish-less chow for 2 weeks
Organs
Aorta (ApoE KO), Brain, Heart, Kidney, Liver, Lung, Macrophage, Muscle, Plasma, Plasma (ApoE KO), Small intestine, Spleen
Measurement
See Metabolonote database.


{{#ifeq:|ja|脂質記載法|Notation}}

The style follows the proposal for lipidomics nomenclature (Pauling JK et al. PLOS ONE 2017, PMID 29161304). Please visit the MS-DIAL page for more details.

Phosphoglycerolipid symbols
Name Notation
Phosphatidic acid PA
R2-lyso-PA LPA
Phosphatidyl-choline PC
R2-lyso-PC LPC
R1-ether-PC EtherPC
Phosphatidyl-ethanolamine PE
R2-lyso-PE LPE
R1-ether-PE EtherPE
Phosphatidyl-inositol PI
R2-lyso-PI LPI
Phosphatidyl-serine PS
R2-lyso-PS LPS
Phosphatidyl-glycerol PG
R2-lyso-PG LPG
Bis(monoacylglycero)phosphate BMP
1-Monoacylglycerol-phospho-2,3-diacylglycerol HBMP
Cardiolipin CL
Glycerolipid, Plant lipid, and other symbols
Name Notation
Triacylglycerol TAG
Diacylglycerol DAG
Monoacylglycerol MAG
Monogalactosyl-diacylglycerol MGDG
Digalactosyl-diacylglycerol DGDG
Sulfoquinovosyl-diacylglycerol SQDG
Diacylglyceryl-trimethylhomoserine DGTS
Glucuronosyl-diacylglycerol GlcADG
Fatty acid FA
Fatty acid ester of hydroxyl fatty acid FAHFA
Acylcarnitine ACar
Sphingomyelin SM
Ceramide symbols<ref>Masukawa Y et al. "Characterization of overall ceramide species in human stratum corneums" J Lipid Res 49
1466-1476, 2008</ref>
non-hydroxy FA
[N]
α-hydroxy FA
[A]
esterified ω-hydroxy FA
[EO]
dihydrosphingosine
[DS]
Cer-NDS Cer-ADS Cer-EODS
sphingosine
[S]
Cer-NS Cer-AS Cer-EOS
phytosphingosine
[P]
Cer-AP Cer-NP Cer-EOP
6-hydroxy sphingosine
[H]
Cer-NH Cer-AH Cer-EOH

<references/>

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